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Cluster: Rep_531_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_30 Rep_531_c_30_19 29952 31112 - 2.A.1.7.17
CAZyme Rep_531_c_30 Rep_531_c_30_20 31147 33345 - GH36
CAZyme Rep_531_c_30 Rep_531_c_30_21 33365 35242 - GH32
NULL(UNKNOWN) Rep_531_c_30 Rep_531_c_30_22 35371 37716 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_531_c_30 Rep_531_c_30_23 37805 37960 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_531_c_30 Rep_531_c_30_24 37921 39726 - GH32
pfam Rep_531_c_30 Rep_531_c_30_25 39808 41544 - SusD_RagB | SusD-like_3
TC Rep_531_c_30 Rep_531_c_30_26 41563 44685 - 1.B.14.6.1
Gene ID: Rep_531_c_30_19
Type: TC
Location: 29952 - 31112 (-)
Gene ID: Rep_531_c_30_20
Type: CAZyme
Location: 31147 - 33345 (-)
Gene ID: Rep_531_c_30_21
Type: CAZyme
Location: 33365 - 35242 (-)
Gene ID: Rep_531_c_30_22
Type:
Location: 35371 - 37716 (-)
Gene ID: Rep_531_c_30_23
Type:
Location: 37805 - 37960 (+)
Gene ID: Rep_531_c_30_24
Type: CAZyme
Location: 37921 - 39726 (-)
Gene ID: Rep_531_c_30_25
Type: pfam
Location: 39808 - 41544 (-)
Gene ID: Rep_531_c_30_26
Type: TC
Location: 41563 - 44685 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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