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Genome Details

Selected Rep_genome_ID: Rep_456
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides sp900759525
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_456 6,392,335 96.8823% 3.85572% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_456_CGC51 CGCFAM_00001 Yes 12 7 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_456_CGC75 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_456_CGC99 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_456_CGC16 CGCFAM_00002 Yes 12 9
Rep_456_CGC46 CGCFAM_00016 Yes 11 5 host glycan
Rep_456_CGC3 CGCFAM_00023 Yes 8 4
Rep_456_CGC95 CGCFAM_00023 Yes 4 1
Rep_456_CGC39 CGCFAM_00025 Yes 9 4 pectin/alpha-glucan
Rep_456_CGC84 CGCFAM_00032 Yes 4 2
Rep_456_CGC28 CGCFAM_00033 Yes 3 1
Rep_456_CGC64 CGCFAM_00038 Yes 4 2
Rep_456_CGC101 CGCFAM_00043 Yes 7 3 alpha-glucan
Rep_456_CGC30 CGCFAM_00043 Yes 4 1 alpha-glucan
PUL0263_Rep_456_C0 CGCFAM_00044 Yes 5 1 xylan
Rep_456_CGC26 CGCFAM_00050 Yes 6 3
Rep_456_CGC68 CGCFAM_00110 Yes 7 4 pectin/host glycan
Rep_456_CGC88 CGCFAM_00118 Yes 4 1
Rep_456_CGC50 CGCFAM_00138 Yes 9 2
Rep_456_CGC63 CGCFAM_00184 Yes 7 2
Rep_456_CGC85 CGCFAM_00212 Yes 10 7 arabinogalactan/pectin
Rep_456_CGC9 CGCFAM_00217 Yes 32 16
Rep_456_CGC1 CGCFAM_00239 Yes 9 6 xylan
Rep_456_CGC72 CGCFAM_00274 Yes 10 2
Rep_456_CGC52 CGCFAM_00275 Yes 8 3
Rep_456_CGC18 CGCFAM_00297 Yes 9 3
Top CAZyme Families