Genome Details
Selected Rep_genome_ID: Rep_2178
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900550935
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR021318 | 2,789,549 | 94.2% | 0.75% | China | Asia | CGMR |
| KY004_bin.86 | 2,955,666 | 98.55% | 1.49% | NA | Africa | H3AfricaPhase2 |
| Rep_2178 | 2,762,523 | 96.9354% | 0.627588% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2178_CGC12 | CGCFAM_00003 | Yes | 4 | 1 | |
| Rep_2178_CGC2 | CGCFAM_00039 | Yes | 10 | 5 | |
| Rep_2178_CGC9 | CGCFAM_00045 | Yes | 5 | 2 | alpha-glucan |
| Rep_2178_CGC24 | CGCFAM_00047 | Yes | 7 | 1 | |
| Rep_2178_CGC30 | CGCFAM_00078 | Yes | 4 | 2 | galactan |
| Rep_2178_CGC1 | CGCFAM_00193 | Yes | 14 | 6 | |
| Rep_2178_CGC7 | CGCFAM_00224 | Yes | 15 | 8 | |
| Rep_2178_CGC26 | CGCFAM_00736 | Yes | 9 | 4 | |
| Rep_2178_CGC15 | CGCFAM_00951 | Yes | 7 | 2 | |
| Rep_2178_CGC6 | CGCFAM_01525 | Yes | 6 | 2 | |
| Rep_2178_CGC16 | CGCFAM_01886 | Yes | 4 | 1 | |
| Rep_2178_CGC28 | CGCFAM_03124 | Yes | 8 | 1 | |
| Rep_2178_CGC38 | CGCFAM_06569 | Yes | 9 | 1 | |
| Rep_2178_CGC37 | CGCFAM_08590 | Yes | 7 | 3 | |
| Rep_2178_CGC11 | CGCFAM_10031 | Yes | 9 | 1 |
Top CAZyme Families