Genome Details
Selected Rep_genome_ID: HRGMv2_4774
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp002437725
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4774 | 2,494,491 | 93% | 0% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4774_CGC11 | CGCFAM_00002 | Yes | 3 | 1 | |
| HRGMv2_4774_CGC13 | CGCFAM_00040 | Yes | 3 | 2 | |
| HRGMv2_4774_CGC16 | CGCFAM_00178 | Yes | 3 | 2 | |
| HRGMv2_4774_CGC17 | CGCFAM_00423 | Yes | 3 | 1 | |
| HRGMv2_4774_CGC20 | CGCFAM_01145 | Yes | 4 | 1 | |
| HRGMv2_4774_CGC9 | CGCFAM_01618 | Yes | 5 | 2 | |
| HRGMv2_4774_CGC5 | CGCFAM_02819 | Yes | 7 | 1 | |
| HRGMv2_4774_CGC22 | CGCFAM_04113 | Yes | 4 | 1 | |
| HRGMv2_4774_CGC6 | CGCFAM_05517 | Yes | 9 | 1 | |
| HRGMv2_4774_CGC3 | CGCFAM_05799 | Yes | 12 | 4 | |
| HRGMv2_4774_CGC15 | CGCFAM_06291 | Yes | 9 | 1 | |
| HRGMv2_4774_CGC8 | CGCFAM_06292 | Yes | 9 | 1 | |
| HRGMv2_4774_CGC1 | CGCFAM_10677 | Yes | 5 | 1 | |
| HRGMv2_4774_CGC18 | CGCFAM_10678 | Yes | 7 | 1 | |
| HRGMv2_4774_CGC2 | CGCFAM_10679 | Yes | 8 | 1 | |
| HRGMv2_4774_CGC7 | CGCFAM_10680 | Yes | 9 | 3 |
Top CAZyme Families