Cluster: HRGMv2_4774_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4774
- CGC Family ID: CGCFAM_00178
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4774_41 | HRGMv2_4774_41_15 | 10032 | 11480 | + | 2.A.66.2.16 |
| CAZyme | HRGMv2_4774_41 | HRGMv2_4774_41_16 | 11467 | 12423 | + | GT2 |
| CAZyme | HRGMv2_4774_41 | HRGMv2_4774_41_17 | 12414 | 13391 | + | GT32 |
Gene ID: HRGMv2_4774_41_15
Type: TC
Location: 10032 - 11480 (+)
Type: TC
Location: 10032 - 11480 (+)
Gene ID: HRGMv2_4774_41_16
Type: CAZyme
Location: 11467 - 12423 (+)
Type: CAZyme
Location: 11467 - 12423 (+)
Gene ID: HRGMv2_4774_41_17
Type: CAZyme
Location: 12414 - 13391 (+)
Type: CAZyme
Location: 12414 - 13391 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp002437725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.