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Cluster: HRGMv2_4774_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4774_12 HRGMv2_4774_12_1 55 1416 + 3.D.6.1.2
TC HRGMv2_4774_12 HRGMv2_4774_12_2 1440 2486 + 3.D.6.1.2
TC HRGMv2_4774_12 HRGMv2_4774_12_3 2483 3091 + 3.D.6.1.2
TC HRGMv2_4774_12 HRGMv2_4774_12_4 3088 3711 + 3.D.6.1.2
TC HRGMv2_4774_12 HRGMv2_4774_12_5 3725 4303 + 3.D.6.1.4
TC HRGMv2_4774_12 HRGMv2_4774_12_6 4358 5170 + 3.D.6.1.3
NULL(UNKNOWN) HRGMv2_4774_12 HRGMv2_4774_12_7 5167 5517 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4774_12 HRGMv2_4774_12_8 5519 5788 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4774_12 HRGMv2_4774_12_9 5806 8133 + CBM35
Gene ID: HRGMv2_4774_12_1
Type: TC
Location: 55 - 1416 (+)
Gene ID: HRGMv2_4774_12_2
Type: TC
Location: 1440 - 2486 (+)
Gene ID: HRGMv2_4774_12_3
Type: TC
Location: 2483 - 3091 (+)
Gene ID: HRGMv2_4774_12_4
Type: TC
Location: 3088 - 3711 (+)
Gene ID: HRGMv2_4774_12_5
Type: TC
Location: 3725 - 4303 (+)
Gene ID: HRGMv2_4774_12_6
Type: TC
Location: 4358 - 5170 (+)
Gene ID: HRGMv2_4774_12_7
Type:
Location: 5167 - 5517 (+)
Gene ID: HRGMv2_4774_12_8
Type:
Location: 5519 - 5788 (+)
Gene ID: HRGMv2_4774_12_9
Type: CAZyme
Location: 5806 - 8133 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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