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Cluster: HRGMv2_4774_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4774_9 HRGMv2_4774_9_4 5604 6623 + GT2
NULL(UNKNOWN) HRGMv2_4774_9 HRGMv2_4774_9_5 6696 7505 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4774_9 HRGMv2_4774_9_6 7799 10762 + GH13_37
CAZyme HRGMv2_4774_9 HRGMv2_4774_9_7 10844 14209 + GH13_14
CAZyme HRGMv2_4774_9 HRGMv2_4774_9_8 14274 16829 + CBM74
TC HRGMv2_4774_9 HRGMv2_4774_9_9 17081 17971 + 3.A.1.4.10
TC HRGMv2_4774_9 HRGMv2_4774_9_10 17999 19027 + 3.A.1.4.10
TC HRGMv2_4774_9 HRGMv2_4774_9_11 19027 19818 + 3.A.1.4.10
TC HRGMv2_4774_9 HRGMv2_4774_9_12 19820 20527 + 3.A.1.4.10
STP HRGMv2_4774_9 HRGMv2_4774_9_13 20530 21174 + CBS | CBS
NULL(UNKNOWN) HRGMv2_4774_9 HRGMv2_4774_9_14 21171 22640 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4774_9 HRGMv2_4774_9_15 22665 23123 + 4.A.2.1.4
Gene ID: HRGMv2_4774_9_4
Type: CAZyme
Location: 5604 - 6623 (+)
Gene ID: HRGMv2_4774_9_5
Type:
Location: 6696 - 7505 (-)
Gene ID: HRGMv2_4774_9_6
Type: CAZyme
Location: 7799 - 10762 (+)
Gene ID: HRGMv2_4774_9_7
Type: CAZyme
Location: 10844 - 14209 (+)
Gene ID: HRGMv2_4774_9_8
Type: CAZyme
Location: 14274 - 16829 (+)
Gene ID: HRGMv2_4774_9_9
Type: TC
Location: 17081 - 17971 (+)
Gene ID: HRGMv2_4774_9_10
Type: TC
Location: 17999 - 19027 (+)
Gene ID: HRGMv2_4774_9_11
Type: TC
Location: 19027 - 19818 (+)
Gene ID: HRGMv2_4774_9_12
Type: TC
Location: 19820 - 20527 (+)
Gene ID: HRGMv2_4774_9_13
Type: STP
Location: 20530 - 21174 (+)
Gene ID: HRGMv2_4774_9_14
Type:
Location: 21171 - 22640 (+)
Gene ID: HRGMv2_4774_9_15
Type: TC
Location: 22665 - 23123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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