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Cluster: HRGMv2_4774_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4774_39 HRGMv2_4774_39_8 8191 9309 - 9.A.23.1.1
NULL(UNKNOWN) HRGMv2_4774_39 HRGMv2_4774_39_9 9572 10105 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4774_39 HRGMv2_4774_39_10 10115 11377 + Aldedh
CAZyme HRGMv2_4774_39 HRGMv2_4774_39_11 11348 12433 - GH18
TC HRGMv2_4774_39 HRGMv2_4774_39_12 12435 14060 - 3.A.1.105.12
TC HRGMv2_4774_39 HRGMv2_4774_39_13 14419 17805 - 3.A.17.1.1
NULL(UNKNOWN) HRGMv2_4774_39 HRGMv2_4774_39_14 18064 18477 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4774_39 HRGMv2_4774_39_15 18625 18897 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4774_39 HRGMv2_4774_39_16 18878 20122 - 3.A.1.112.9
Gene ID: HRGMv2_4774_39_8
Type: TC
Location: 8191 - 9309 (-)
Gene ID: HRGMv2_4774_39_9
Type:
Location: 9572 - 10105 (+)
Gene ID: HRGMv2_4774_39_10
Type: pfam
Location: 10115 - 11377 (+)
Gene ID: HRGMv2_4774_39_11
Type: CAZyme
Location: 11348 - 12433 (-)
Gene ID: HRGMv2_4774_39_12
Type: TC
Location: 12435 - 14060 (-)
Gene ID: HRGMv2_4774_39_13
Type: TC
Location: 14419 - 17805 (-)
Gene ID: HRGMv2_4774_39_14
Type:
Location: 18064 - 18477 (-)
Gene ID: HRGMv2_4774_39_15
Type:
Location: 18625 - 18897 (-)
Gene ID: HRGMv2_4774_39_16
Type: TC
Location: 18878 - 20122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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