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Cluster: HRGMv2_4774_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4774_14 HRGMv2_4774_14_25 30938 34135 + GH13_11
pfam HRGMv2_4774_14 HRGMv2_4774_14_26 34242 35630 + SH3_3
TC HRGMv2_4774_14 HRGMv2_4774_14_27 35638 37572 + 3.A.1.121.4
pfam HRGMv2_4774_14 HRGMv2_4774_14_28 37587 38561 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_10 | GDP_Man_Dehyd
peptidase HRGMv2_4774_14 HRGMv2_4774_14_29 38576 39805 + M20.UPW
TC HRGMv2_4774_14 HRGMv2_4774_14_30 39911 40981 - 9.B.146.1.3
pfam HRGMv2_4774_14 HRGMv2_4774_14_31 40990 42582 - AICARFT_IMPCHas
STP HRGMv2_4774_14 HRGMv2_4774_14_32 42672 44021 + EPSP_synthase
TC HRGMv2_4774_14 HRGMv2_4774_14_33 44141 45253 + 9.B.34.1.3
Gene ID: HRGMv2_4774_14_25
Type: CAZyme
Location: 30938 - 34135 (+)
Gene ID: HRGMv2_4774_14_26
Type: pfam
Location: 34242 - 35630 (+)
Gene ID: HRGMv2_4774_14_27
Type: TC
Location: 35638 - 37572 (+)
Gene ID: HRGMv2_4774_14_28
Type: pfam
Location: 37587 - 38561 (+)
Gene ID: HRGMv2_4774_14_29
Type: peptidase
Location: 38576 - 39805 (+)
Gene ID: HRGMv2_4774_14_30
Type: TC
Location: 39911 - 40981 (-)
Gene ID: HRGMv2_4774_14_31
Type: pfam
Location: 40990 - 42582 (-)
Gene ID: HRGMv2_4774_14_32
Type: STP
Location: 42672 - 44021 (+)
Gene ID: HRGMv2_4774_14_33
Type: TC
Location: 44141 - 45253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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