Cluster: HRGMv2_4774_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4774
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4774_28 | HRGMv2_4774_28_21 | 22434 | 24077 | + | 3.D.10.1.2 |
| NULL(UNKNOWN) | HRGMv2_4774_28 | HRGMv2_4774_28_22 | 24232 | 24480 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4774_28 | HRGMv2_4774_28_23 | 24483 | 25607 | - | GT4 |
Gene ID: HRGMv2_4774_28_21
Type: TC
Location: 22434 - 24077 (+)
Type: TC
Location: 22434 - 24077 (+)
Gene ID: HRGMv2_4774_28_22
Type:
Location: 24232 - 24480 (+)
Type:
Location: 24232 - 24480 (+)
Gene ID: HRGMv2_4774_28_23
Type: CAZyme
Location: 24483 - 25607 (-)
Type: CAZyme
Location: 24483 - 25607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp002437725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.