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Cluster: HRGMv2_4774_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4774_14 HRGMv2_4774_14_5 3637 5751 + CBM48 | GH13_11
CAZyme HRGMv2_4774_14 HRGMv2_4774_14_6 5914 8412 + GT35
TC HRGMv2_4774_14 HRGMv2_4774_14_7 8523 9965 - 2.A.25.1.4
STP HRGMv2_4774_14 HRGMv2_4774_14_8 10264 11178 + Pyr_redox_2
CAZyme HRGMv2_4774_14 HRGMv2_4774_14_9 11222 12946 + GH3
pfam HRGMv2_4774_14 HRGMv2_4774_14_10 12962 13642 - DTW
TC HRGMv2_4774_14 HRGMv2_4774_14_11 13937 16234 + 3.A.3.5.15
STP HRGMv2_4774_14 HRGMv2_4774_14_12 16279 16482 + HMA
TC HRGMv2_4774_14 HRGMv2_4774_14_13 16894 18597 + 2.A.53.3.9
Gene ID: HRGMv2_4774_14_5
Type: CAZyme
Location: 3637 - 5751 (+)
Gene ID: HRGMv2_4774_14_6
Type: CAZyme
Location: 5914 - 8412 (+)
Gene ID: HRGMv2_4774_14_7
Type: TC
Location: 8523 - 9965 (-)
Gene ID: HRGMv2_4774_14_8
Type: STP
Location: 10264 - 11178 (+)
Gene ID: HRGMv2_4774_14_9
Type: CAZyme
Location: 11222 - 12946 (+)
Gene ID: HRGMv2_4774_14_10
Type: pfam
Location: 12962 - 13642 (-)
Gene ID: HRGMv2_4774_14_11
Type: TC
Location: 13937 - 16234 (+)
Gene ID: HRGMv2_4774_14_12
Type: STP
Location: 16279 - 16482 (+)
Gene ID: HRGMv2_4774_14_13
Type: TC
Location: 16894 - 18597 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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