Genome Details
Selected Rep_genome_ID: HRGMv2_2075
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR034271 | 2,932,996 | 95.65% | 1.45% | China | Asia | CGMR |
| GCA_021632045.1_ASM2163204v1_genomic | 3,161,042 | 98.87% | 1.17% | NA | Africa | H3AfricaPhase1 |
| GH045_bin.54 | 3,217,908 | 98.7% | 0.97% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2075 | 3,187,652 | 99.51% | 0.966% | China | Asia | HRGM |
| MGYG000004250 | 3,091,301 | 99.52% | 1.45% | United Kingdom | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_A_4_1104.133 | 3,084,685 | 97.49% | 0.97% | NA | Africa | Hadza |
| Rep_2216 | 3,218,511 | 99.4203% | 1.44928% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2075_CGC25 | CGCFAM_00003 | Yes | 6 | 2 | |
| HRGMv2_2075_CGC48 | CGCFAM_00045 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_2075_CGC45 | CGCFAM_00121 | Yes | 13 | 3 | |
| HRGMv2_2075_CGC46 | CGCFAM_00168 | Yes | 15 | 6 | |
| HRGMv2_2075_CGC34 | CGCFAM_00178 | Yes | 4 | 1 | |
| HRGMv2_2075_CGC10 | CGCFAM_00312 | Yes | 9 | 2 | host glycan |
| HRGMv2_2075_CGC9 | CGCFAM_00347 | Yes | 6 | 2 | |
| HRGMv2_2075_CGC40 | CGCFAM_00391 | Yes | 3 | 1 | |
| HRGMv2_2075_CGC36 | CGCFAM_00704 | Yes | 22 | 2 | |
| HRGMv2_2075_CGC21 | CGCFAM_00973 | Yes | 7 | 2 | |
| HRGMv2_2075_CGC16 | CGCFAM_01082 | Yes | 3 | 1 | |
| HRGMv2_2075_CGC44 | CGCFAM_01499 | Yes | 4 | 1 | |
| HRGMv2_2075_CGC41 | CGCFAM_01573 | Yes | 17 | 3 | |
| HRGMv2_2075_CGC47 | CGCFAM_01676 | Yes | 14 | 1 | |
| HRGMv2_2075_CGC24 | CGCFAM_01688 | Yes | 11 | 6 | |
| HRGMv2_2075_CGC32 | CGCFAM_01753 | Yes | 8 | 2 | |
| HRGMv2_2075_CGC33 | CGCFAM_04035 | Yes | 7 | 1 | |
| HRGMv2_2075_CGC31 | CGCFAM_05916 | Yes | 5 | 2 | |
| HRGMv2_2075_CGC52 | CGCFAM_09456 | Yes | 3 | 1 | |
| HRGMv2_2075_CGC27 | CGCFAM_09952 | Yes | 12 | 2 | |
| HRGMv2_2075_CGC7 | CGCFAM_09954 | Yes | 12 | 6 |
Top CAZyme Families