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Cluster: HRGMv2_2075_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_54 55865 56860 - GT2
TC HRGMv2_2075_9 HRGMv2_2075_9_55 56853 58601 - 3.A.1.106.15
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_56 58603 59664 - GT2
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_57 59664 60770 - GT2
pfam HRGMv2_2075_9 HRGMv2_2075_9_58 60890 61588 - Hexapep | Hexapep_2
NULL(UNKNOWN) HRGMv2_2075_9 HRGMv2_2075_9_59 61620 62522 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_60 62557 63495 - GT11
pfam HRGMv2_2075_9 HRGMv2_2075_9_61 63492 64703 - Glycos_transf_1 | Glyco_trans_1_4
pfam HRGMv2_2075_9 HRGMv2_2075_9_62 64700 65854 - Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_63 65866 66966 - GT4
CAZyme HRGMv2_2075_9 HRGMv2_2075_9_64 66963 68081 - GT4
Gene ID: HRGMv2_2075_9_54
Type: CAZyme
Location: 55865 - 56860 (-)
Gene ID: HRGMv2_2075_9_55
Type: TC
Location: 56853 - 58601 (-)
Gene ID: HRGMv2_2075_9_56
Type: CAZyme
Location: 58603 - 59664 (-)
Gene ID: HRGMv2_2075_9_57
Type: CAZyme
Location: 59664 - 60770 (-)
Gene ID: HRGMv2_2075_9_58
Type: pfam
Location: 60890 - 61588 (-)
Gene ID: HRGMv2_2075_9_59
Type:
Location: 61620 - 62522 (-)
Gene ID: HRGMv2_2075_9_60
Type: CAZyme
Location: 62557 - 63495 (-)
Gene ID: HRGMv2_2075_9_61
Type: pfam
Location: 63492 - 64703 (-)
Gene ID: HRGMv2_2075_9_62
Type: pfam
Location: 64700 - 65854 (-)
Gene ID: HRGMv2_2075_9_63
Type: CAZyme
Location: 65866 - 66966 (-)
Gene ID: HRGMv2_2075_9_64
Type: CAZyme
Location: 66963 - 68081 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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