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Cluster: HRGMv2_2075_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2075_2 HRGMv2_2075_2_80 84905 86284 + 8.A.3.3.3
pfam HRGMv2_2075_2 HRGMv2_2075_2_81 86262 87014 + CpsB_CapC
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_82 87027 88016 + GT2
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_83 88021 88953 + GT2
NULL(UNKNOWN) HRGMv2_2075_2 HRGMv2_2075_2_84 88999 90354 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_85 90351 91367 + GT2
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_86 91381 92331 + GT32
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_87 92348 93196 + GT32
pfam HRGMv2_2075_2 HRGMv2_2075_2_88 93226 93816 + VanZ
pfam HRGMv2_2075_2 HRGMv2_2075_2_89 93809 95902 + CotH | Fn3_assoc | CHB_HEX_C_1
TC HRGMv2_2075_2 HRGMv2_2075_2_90 95895 97409 + 2.A.66.1.40
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_91 97434 99485 + GT2
Gene ID: HRGMv2_2075_2_80
Type: TC
Location: 84905 - 86284 (+)
Gene ID: HRGMv2_2075_2_81
Type: pfam
Location: 86262 - 87014 (+)
Gene ID: HRGMv2_2075_2_82
Type: CAZyme
Location: 87027 - 88016 (+)
Gene ID: HRGMv2_2075_2_83
Type: CAZyme
Location: 88021 - 88953 (+)
Gene ID: HRGMv2_2075_2_84
Type:
Location: 88999 - 90354 (+)
Gene ID: HRGMv2_2075_2_85
Type: CAZyme
Location: 90351 - 91367 (+)
Gene ID: HRGMv2_2075_2_86
Type: CAZyme
Location: 91381 - 92331 (+)
Gene ID: HRGMv2_2075_2_87
Type: CAZyme
Location: 92348 - 93196 (+)
Gene ID: HRGMv2_2075_2_88
Type: pfam
Location: 93226 - 93816 (+)
Gene ID: HRGMv2_2075_2_89
Type: pfam
Location: 93809 - 95902 (+)
Gene ID: HRGMv2_2075_2_90
Type: TC
Location: 95895 - 97409 (+)
Gene ID: HRGMv2_2075_2_91
Type: CAZyme
Location: 97434 - 99485 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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