Cluster: HRGMv2_2075_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2075
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2075_9 | HRGMv2_2075_9_69 | 71294 | 72394 | - | GT4 |
| CAZyme | HRGMv2_2075_9 | HRGMv2_2075_9_70 | 72598 | 73824 | - | GT4 |
| pfam | HRGMv2_2075_9 | HRGMv2_2075_9_71 | 73821 | 74705 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| NULL(UNKNOWN) | HRGMv2_2075_9 | HRGMv2_2075_9_72 | 74849 | 75493 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2075_9 | HRGMv2_2075_9_73 | 75497 | 76147 | - | 9.B.18.1.3 |
| TC | HRGMv2_2075_9 | HRGMv2_2075_9_74 | 76153 | 78018 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_2075_9_69
Type: CAZyme
Location: 71294 - 72394 (-)
Type: CAZyme
Location: 71294 - 72394 (-)
Gene ID: HRGMv2_2075_9_70
Type: CAZyme
Location: 72598 - 73824 (-)
Type: CAZyme
Location: 72598 - 73824 (-)
Gene ID: HRGMv2_2075_9_71
Type: pfam
Location: 73821 - 74705 (-)
Type: pfam
Location: 73821 - 74705 (-)
Gene ID: HRGMv2_2075_9_72
Type:
Location: 74849 - 75493 (-)
Type:
Location: 74849 - 75493 (-)
Gene ID: HRGMv2_2075_9_73
Type: TC
Location: 75497 - 76147 (-)
Type: TC
Location: 75497 - 76147 (-)
Gene ID: HRGMv2_2075_9_74
Type: TC
Location: 76153 - 78018 (-)
Type: TC
Location: 76153 - 78018 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2075_9_71 | vegetarian > vegan | 7.87208 | 0.00229 |