dbCAN HGM

Cluster: HRGMv2_2075_CGC27

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2075_11	HRGMv2_2075_11_9	9422	10423	+	3.A.1.34.1
TC	HRGMv2_2075_11	HRGMv2_2075_11_10	10572	11453	+	3.A.1.34.1
TC	HRGMv2_2075_11	HRGMv2_2075_11_11	11447	12220	+	3.A.1.34.1
pfam	HRGMv2_2075_11	HRGMv2_2075_11_12	12417	13406	-	PHP
TC	HRGMv2_2075_11	HRGMv2_2075_11_13	13589	15226	-	3.A.1.121.4
TF	HRGMv2_2075_11	HRGMv2_2075_11_14	15402	16385	+	LacI
CAZyme	HRGMv2_2075_11	HRGMv2_2075_11_15	16636	17199	+	CBM61
CAZyme	HRGMv2_2075_11	HRGMv2_2075_11_16	17202	18275	+	GH53
TC	HRGMv2_2075_11	HRGMv2_2075_11_17	18310	19485	+	3.A.1.1.6
TC	HRGMv2_2075_11	HRGMv2_2075_11_18	19493	20404	+	3.A.1.1.27
TC	HRGMv2_2075_11	HRGMv2_2075_11_19	20405	21250	+	3.A.1.1.26
TC	HRGMv2_2075_11	HRGMv2_2075_11_20	21346	22761	+	2.A.1.2.88

Gene ID: HRGMv2_2075_11_9
Type: TC
Location: 9422 - 10423 (+)

Gene ID: HRGMv2_2075_11_10
Type: TC
Location: 10572 - 11453 (+)

Gene ID: HRGMv2_2075_11_11
Type: TC
Location: 11447 - 12220 (+)

Gene ID: HRGMv2_2075_11_12
Type: pfam
Location: 12417 - 13406 (-)

Gene ID: HRGMv2_2075_11_13
Type: TC
Location: 13589 - 15226 (-)

Gene ID: HRGMv2_2075_11_14
Type: TF
Location: 15402 - 16385 (+)

Gene ID: HRGMv2_2075_11_15
Type: CAZyme
Location: 16636 - 17199 (+)

Gene ID: HRGMv2_2075_11_16
Type: CAZyme
Location: 17202 - 18275 (+)

Gene ID: HRGMv2_2075_11_17
Type: TC
Location: 18310 - 19485 (+)

Gene ID: HRGMv2_2075_11_18
Type: TC
Location: 19493 - 20404 (+)

Gene ID: HRGMv2_2075_11_19
Type: TC
Location: 20405 - 21250 (+)

Gene ID: HRGMv2_2075_11_20
Type: TC
Location: 21346 - 22761 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2075_11_14	vegetarian > vegan	1.20849	0.00229
HRGMv2_2075_11_15	vegetarian > vegan	1.22372	0.00229

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2075_11_9	UC > CD	1.16164	0.00215
HRGMv2_2075_11_9	nonIBD > CD	1.22689	0.00068
HRGMv2_2075_11_10	UC > CD	1.37919	0.00215
HRGMv2_2075_11_10	nonIBD > CD	1.58982	0.00068
HRGMv2_2075_11_11	UC > CD	1.66785	0.00215
HRGMv2_2075_11_11	nonIBD > CD	1.42617	0.00068
HRGMv2_2075_11_17	UC > CD	1.43342	0.00215
HRGMv2_2075_11_17	nonIBD > CD	2.13725	0.00068
HRGMv2_2075_11_18	UC > CD	1.35806	0.00215
HRGMv2_2075_11_18	nonIBD > CD	1.46488	0.00068
HRGMv2_2075_11_20	UC > CD	1.08693	0.00215
HRGMv2_2075_11_20	nonIBD > CD	1.68504	0.00068