Cluster: HRGMv2_2075_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2075
- CGC Family ID: CGCFAM_04035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2075_16 | HRGMv2_2075_16_11 | 9350 | 10096 | - | 9.B.158.1.1 |
| TC | HRGMv2_2075_16 | HRGMv2_2075_16_12 | 10113 | 11666 | - | 3.A.1.121.4 |
| pfam | HRGMv2_2075_16 | HRGMv2_2075_16_13 | 11882 | 12532 | + | DUF4358 |
| TC | HRGMv2_2075_16 | HRGMv2_2075_16_14 | 12549 | 13964 | + | 2.A.50.2.1 |
| pfam | HRGMv2_2075_16 | HRGMv2_2075_16_15 | 13985 | 15103 | + | DHHW | ALGX |
| pfam | HRGMv2_2075_16 | HRGMv2_2075_16_16 | 15144 | 15998 | + | RrnaAD |
| CAZyme | HRGMv2_2075_16 | HRGMv2_2075_16_17 | 16011 | 17087 | - | GT28 |
Gene ID: HRGMv2_2075_16_11
Type: TC
Location: 9350 - 10096 (-)
Type: TC
Location: 9350 - 10096 (-)
Gene ID: HRGMv2_2075_16_12
Type: TC
Location: 10113 - 11666 (-)
Type: TC
Location: 10113 - 11666 (-)
Gene ID: HRGMv2_2075_16_13
Type: pfam
Location: 11882 - 12532 (+)
Type: pfam
Location: 11882 - 12532 (+)
Gene ID: HRGMv2_2075_16_14
Type: TC
Location: 12549 - 13964 (+)
Type: TC
Location: 12549 - 13964 (+)
Gene ID: HRGMv2_2075_16_15
Type: pfam
Location: 13985 - 15103 (+)
Type: pfam
Location: 13985 - 15103 (+)
Gene ID: HRGMv2_2075_16_16
Type: pfam
Location: 15144 - 15998 (+)
Type: pfam
Location: 15144 - 15998 (+)
Gene ID: HRGMv2_2075_16_17
Type: CAZyme
Location: 16011 - 17087 (-)
Type: CAZyme
Location: 16011 - 17087 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.