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Cluster: HRGMv2_2075_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2075_2 HRGMv2_2075_2_123 136234 138030 - 8.A.59.2.1
STP HRGMv2_2075_2 HRGMv2_2075_2_124 138307 139662 + SBP_bac_1
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_125 139748 141061 + GH28
CAZyme HRGMv2_2075_2 HRGMv2_2075_2_126 141078 142772 + GH2
TC HRGMv2_2075_2 HRGMv2_2075_2_127 142797 143690 + 3.A.1.1.11
TC HRGMv2_2075_2 HRGMv2_2075_2_128 143694 144539 + 3.A.1.1.11
Gene ID: HRGMv2_2075_2_123
Type: TC
Location: 136234 - 138030 (-)
Gene ID: HRGMv2_2075_2_124
Type: STP
Location: 138307 - 139662 (+)
Gene ID: HRGMv2_2075_2_125
Type: CAZyme
Location: 139748 - 141061 (+)
Gene ID: HRGMv2_2075_2_126
Type: CAZyme
Location: 141078 - 142772 (+)
Gene ID: HRGMv2_2075_2_127
Type: TC
Location: 142797 - 143690 (+)
Gene ID: HRGMv2_2075_2_128
Type: TC
Location: 143694 - 144539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2075_2_128 vegetarian > vegan 1.13580 0.00229

🧭 Explore Read Mapping of CGC

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