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Cluster: HRGMv2_2075_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_15 HRGMv2_2075_15_42 48014 49936 + GH31_7
TC HRGMv2_2075_15 HRGMv2_2075_15_43 49986 51302 + 3.A.1.1.44
TC HRGMv2_2075_15 HRGMv2_2075_15_44 51380 52285 + 3.A.1.1.11
TC HRGMv2_2075_15 HRGMv2_2075_15_45 52275 53111 + 3.A.1.1.39
CAZyme HRGMv2_2075_15 HRGMv2_2075_15_46 53127 55118 + GH31_1
STP HRGMv2_2075_15 HRGMv2_2075_15_47 55396 55608 + FeoA
STP HRGMv2_2075_15 HRGMv2_2075_15_48 55647 55868 + FeoA
TC HRGMv2_2075_15 HRGMv2_2075_15_49 56011 58506 + 9.A.8.1.6
Gene ID: HRGMv2_2075_15_42
Type: CAZyme
Location: 48014 - 49936 (+)
Gene ID: HRGMv2_2075_15_43
Type: TC
Location: 49986 - 51302 (+)
Gene ID: HRGMv2_2075_15_44
Type: TC
Location: 51380 - 52285 (+)
Gene ID: HRGMv2_2075_15_45
Type: TC
Location: 52275 - 53111 (+)
Gene ID: HRGMv2_2075_15_46
Type: CAZyme
Location: 53127 - 55118 (+)
Gene ID: HRGMv2_2075_15_47
Type: STP
Location: 55396 - 55608 (+)
Gene ID: HRGMv2_2075_15_48
Type: STP
Location: 55647 - 55868 (+)
Gene ID: HRGMv2_2075_15_49
Type: TC
Location: 56011 - 58506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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