Cluster: HRGMv2_2075_CGC46
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2075
- CGC Family ID: CGCFAM_00168
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_4 | 6121 | 7059 | - | GT2 |
| pfam | HRGMv2_2075_35 | HRGMv2_2075_35_5 | 7187 | 8395 | - | LytR_cpsA_psr |
| TC | HRGMv2_2075_35 | HRGMv2_2075_35_6 | 8424 | 9830 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_7 | 9932 | 10924 | - | GT2 |
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_8 | 10921 | 12387 | - | GT2 |
| pfam | HRGMv2_2075_35 | HRGMv2_2075_35_9 | 12590 | 14311 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_10 | 14420 | 16477 | - | GT2 |
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_11 | 16470 | 18407 | - | GT2 |
| pfam | HRGMv2_2075_35 | HRGMv2_2075_35_12 | 18421 | 20493 | - | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 |
| TC | HRGMv2_2075_35 | HRGMv2_2075_35_13 | 20497 | 21846 | - | 3.A.1.103.6 |
| pfam | HRGMv2_2075_35 | HRGMv2_2075_35_14 | 21853 | 23376 | - | DUF6056 |
| NULL(UNKNOWN) | HRGMv2_2075_35 | HRGMv2_2075_35_15 | 23396 | 24895 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2075_35 | HRGMv2_2075_35_16 | 24918 | 25922 | - | 3.A.1.104.1 |
| pfam | HRGMv2_2075_35 | HRGMv2_2075_35_17 | 25897 | 26481 | - | dTDP_sugar_isom |
| CAZyme | HRGMv2_2075_35 | HRGMv2_2075_35_18 | 26514 | 27812 | - | GH25 |
Gene ID: HRGMv2_2075_35_4
Type: CAZyme
Location: 6121 - 7059 (-)
Type: CAZyme
Location: 6121 - 7059 (-)
Gene ID: HRGMv2_2075_35_5
Type: pfam
Location: 7187 - 8395 (-)
Type: pfam
Location: 7187 - 8395 (-)
Gene ID: HRGMv2_2075_35_6
Type: TC
Location: 8424 - 9830 (-)
Type: TC
Location: 8424 - 9830 (-)
Gene ID: HRGMv2_2075_35_7
Type: CAZyme
Location: 9932 - 10924 (-)
Type: CAZyme
Location: 9932 - 10924 (-)
Gene ID: HRGMv2_2075_35_8
Type: CAZyme
Location: 10921 - 12387 (-)
Type: CAZyme
Location: 10921 - 12387 (-)
Gene ID: HRGMv2_2075_35_9
Type: pfam
Location: 12590 - 14311 (-)
Type: pfam
Location: 12590 - 14311 (-)
Gene ID: HRGMv2_2075_35_10
Type: CAZyme
Location: 14420 - 16477 (-)
Type: CAZyme
Location: 14420 - 16477 (-)
Gene ID: HRGMv2_2075_35_11
Type: CAZyme
Location: 16470 - 18407 (-)
Type: CAZyme
Location: 16470 - 18407 (-)
Gene ID: HRGMv2_2075_35_12
Type: pfam
Location: 18421 - 20493 (-)
Type: pfam
Location: 18421 - 20493 (-)
Gene ID: HRGMv2_2075_35_13
Type: TC
Location: 20497 - 21846 (-)
Type: TC
Location: 20497 - 21846 (-)
Gene ID: HRGMv2_2075_35_14
Type: pfam
Location: 21853 - 23376 (-)
Type: pfam
Location: 21853 - 23376 (-)
Gene ID: HRGMv2_2075_35_15
Type:
Location: 23396 - 24895 (-)
Type:
Location: 23396 - 24895 (-)
Gene ID: HRGMv2_2075_35_16
Type: TC
Location: 24918 - 25922 (-)
Type: TC
Location: 24918 - 25922 (-)
Gene ID: HRGMv2_2075_35_17
Type: pfam
Location: 25897 - 26481 (-)
Type: pfam
Location: 25897 - 26481 (-)
Gene ID: HRGMv2_2075_35_18
Type: CAZyme
Location: 26514 - 27812 (-)
Type: CAZyme
Location: 26514 - 27812 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp003447295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.