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Cluster: HRGMv2_2075_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2075_30 HRGMv2_2075_30_15 16540 17505 - 3.A.1.2.15
TC HRGMv2_2075_30 HRGMv2_2075_30_16 17518 19008 - 3.A.1.2.20
CAZyme HRGMv2_2075_30 HRGMv2_2075_30_17 19020 20768 - CE1
TC HRGMv2_2075_30 HRGMv2_2075_30_18 20908 23298 - 3.A.16.1.2
CAZyme HRGMv2_2075_30 HRGMv2_2075_30_19 23735 24856 - CE9
sulfatase HRGMv2_2075_30 HRGMv2_2075_30_20 24936 25661 - S1_9
TF HRGMv2_2075_30 HRGMv2_2075_30_21 25725 26501 - HTH_AraC
TC HRGMv2_2075_30 HRGMv2_2075_30_22 26591 27445 - 3.A.1.1.2
TC HRGMv2_2075_30 HRGMv2_2075_30_23 27457 28344 - 3.A.1.1.32
STP HRGMv2_2075_30 HRGMv2_2075_30_24 28422 29801 - SBP_bac_1
TC HRGMv2_2075_30 HRGMv2_2075_30_25 29911 31686 - 8.A.59.2.1
pfam HRGMv2_2075_30 HRGMv2_2075_30_26 31781 33199 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_2075_30 HRGMv2_2075_30_27 33339 35597 - GH94
Gene ID: HRGMv2_2075_30_15
Type: TC
Location: 16540 - 17505 (-)
Gene ID: HRGMv2_2075_30_16
Type: TC
Location: 17518 - 19008 (-)
Gene ID: HRGMv2_2075_30_17
Type: CAZyme
Location: 19020 - 20768 (-)
Gene ID: HRGMv2_2075_30_18
Type: TC
Location: 20908 - 23298 (-)
Gene ID: HRGMv2_2075_30_19
Type: CAZyme
Location: 23735 - 24856 (-)
Gene ID: HRGMv2_2075_30_20
Type: sulfatase
Location: 24936 - 25661 (-)
Gene ID: HRGMv2_2075_30_21
Type: TF
Location: 25725 - 26501 (-)
Gene ID: HRGMv2_2075_30_22
Type: TC
Location: 26591 - 27445 (-)
Gene ID: HRGMv2_2075_30_23
Type: TC
Location: 27457 - 28344 (-)
Gene ID: HRGMv2_2075_30_24
Type: STP
Location: 28422 - 29801 (-)
Gene ID: HRGMv2_2075_30_25
Type: TC
Location: 29911 - 31686 (-)
Gene ID: HRGMv2_2075_30_26
Type: pfam
Location: 31781 - 33199 (-)
Gene ID: HRGMv2_2075_30_27
Type: CAZyme
Location: 33339 - 35597 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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