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Cluster: HRGMv2_2075_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2075_3 HRGMv2_2075_3_11 10780 12939 + GH112
TC HRGMv2_2075_3 HRGMv2_2075_3_12 13010 14365 + 3.A.1.1.4
TC HRGMv2_2075_3 HRGMv2_2075_3_13 14439 15317 + 3.A.1.1.4
TC HRGMv2_2075_3 HRGMv2_2075_3_14 15310 16116 + 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_2075_3 HRGMv2_2075_3_15 16116 16589 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2075_3 HRGMv2_2075_3_16 16540 17847 + GH136
TC HRGMv2_2075_3 HRGMv2_2075_3_17 18017 19006 + 3.A.1.11.1
TC HRGMv2_2075_3 HRGMv2_2075_3_18 18987 19865 + 3.A.1.11.1
TC HRGMv2_2075_3 HRGMv2_2075_3_19 19869 20669 + 3.A.1.11.1
Gene ID: HRGMv2_2075_3_11
Type: CAZyme
Location: 10780 - 12939 (+)
Gene ID: HRGMv2_2075_3_12
Type: TC
Location: 13010 - 14365 (+)
Gene ID: HRGMv2_2075_3_13
Type: TC
Location: 14439 - 15317 (+)
Gene ID: HRGMv2_2075_3_14
Type: TC
Location: 15310 - 16116 (+)
Gene ID: HRGMv2_2075_3_15
Type:
Location: 16116 - 16589 (+)
Gene ID: HRGMv2_2075_3_16
Type: CAZyme
Location: 16540 - 17847 (+)
Gene ID: HRGMv2_2075_3_17
Type: TC
Location: 18017 - 19006 (+)
Gene ID: HRGMv2_2075_3_18
Type: TC
Location: 18987 - 19865 (+)
Gene ID: HRGMv2_2075_3_19
Type: TC
Location: 19869 - 20669 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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