Genome Details
Selected Rep_genome_ID: HRGMv2_1906
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR017337 | 2,537,067 | 97.3% | 0.13% | China | Asia | CGMR |
| HRGMv2_1906 | 2,380,466 | 100% | 0.134% | South Korea | Asia | HRGM |
| MGYG000004834 | 2,366,163 | 99.06% | 2.02% | China | Asia | UHGG |
| REFINED_METABAT215_SUBJECT_CONTIGS_1500_ASSEMBLY_K77_MERGED__Pilot_MoBio_Fiber_L_20_7018.182 | 2,338,078 | 96.23% | 1.08% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1906_CGC3 | CGCFAM_00100 | Yes | 12 | 1 | |
| HRGMv2_1906_CGC17 | CGCFAM_00373 | Yes | 3 | 1 | |
| HRGMv2_1906_CGC14 | CGCFAM_01864 | Yes | 7 | 1 | |
| HRGMv2_1906_CGC13 | CGCFAM_02350 | Yes | 4 | 3 | |
| HRGMv2_1906_CGC5 | CGCFAM_02353 | Yes | 5 | 3 | |
| HRGMv2_1906_CGC2 | CGCFAM_02607 | Yes | 4 | 1 | |
| HRGMv2_1906_CGC1 | CGCFAM_02888 | Yes | 3 | 1 | |
| HRGMv2_1906_CGC23 | CGCFAM_03019 | Yes | 4 | 1 | |
| HRGMv2_1906_CGC26 | CGCFAM_03779 | Yes | 5 | 2 | |
| HRGMv2_1906_CGC31 | CGCFAM_04727 | Yes | 4 | 1 | |
| HRGMv2_1906_CGC30 | CGCFAM_05181 | Yes | 3 | 1 | |
| HRGMv2_1906_CGC25 | CGCFAM_06782 | Yes | 4 | 1 | |
| HRGMv2_1906_CGC18 | CGCFAM_06812 | Yes | 6 | 2 | |
| HRGMv2_1906_CGC8 | CGCFAM_08013 | Yes | 5 | 2 | |
| HRGMv2_1906_CGC28 | CGCFAM_09901 | Yes | 4 | 1 | |
| HRGMv2_1906_CGC10 | CGCFAM_09902 | Yes | 4 | 1 |
Top CAZyme Families