Cluster: HRGMv2_1906_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_02350
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_4 | HRGMv2_1906_4_111 | 109106 | 111202 | - | GH13_14 |
| TC | HRGMv2_1906_4 | HRGMv2_1906_4_112 | 111337 | 113007 | - | 2.A.58.2.2 |
| CAZyme | HRGMv2_1906_4 | HRGMv2_1906_4_113 | 113454 | 115850 | - | GT35 |
| CAZyme | HRGMv2_1906_4 | HRGMv2_1906_4_114 | 115867 | 117738 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_1906_4_111
Type: CAZyme
Location: 109106 - 111202 (-)
Type: CAZyme
Location: 109106 - 111202 (-)
Gene ID: HRGMv2_1906_4_112
Type: TC
Location: 111337 - 113007 (-)
Type: TC
Location: 111337 - 113007 (-)
Gene ID: HRGMv2_1906_4_113
Type: CAZyme
Location: 113454 - 115850 (-)
Type: CAZyme
Location: 113454 - 115850 (-)
Gene ID: HRGMv2_1906_4_114
Type: CAZyme
Location: 115867 - 117738 (-)
Type: CAZyme
Location: 115867 - 117738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.