Cluster: HRGMv2_1906_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_02888
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_1 | HRGMv2_1906_1_9 | 7851 | 8219 | - | 1.A.43.1.2 |
| TC | HRGMv2_1906_1 | HRGMv2_1906_1_10 | 8212 | 9906 | - | 9.B.146.1.2 |
| CAZyme | HRGMv2_1906_1 | HRGMv2_1906_1_11 | 10084 | 11235 | + | GH170 |
Gene ID: HRGMv2_1906_1_9
Type: TC
Location: 7851 - 8219 (-)
Type: TC
Location: 7851 - 8219 (-)
Gene ID: HRGMv2_1906_1_10
Type: TC
Location: 8212 - 9906 (-)
Type: TC
Location: 8212 - 9906 (-)
Gene ID: HRGMv2_1906_1_11
Type: CAZyme
Location: 10084 - 11235 (+)
Type: CAZyme
Location: 10084 - 11235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.