Cluster: HRGMv2_1906_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_03779
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_24 | HRGMv2_1906_24_23 | 26519 | 27559 | - | 9.B.97.1.2 |
| CAZyme | HRGMv2_1906_24 | HRGMv2_1906_24_24 | 27572 | 30196 | - | GT2 |
| pfam | HRGMv2_1906_24 | HRGMv2_1906_24_25 | 30330 | 31346 | - | ADH_zinc_N | ADH_N | Glu_dehyd_C |
| pfam | HRGMv2_1906_24 | HRGMv2_1906_24_26 | 31346 | 32053 | - | NTP_transferase | IspD | NTP_transf_3 |
| CAZyme | HRGMv2_1906_24 | HRGMv2_1906_24_27 | 32167 | 34290 | - | GT2 | GT2 |
Gene ID: HRGMv2_1906_24_23
Type: TC
Location: 26519 - 27559 (-)
Type: TC
Location: 26519 - 27559 (-)
Gene ID: HRGMv2_1906_24_24
Type: CAZyme
Location: 27572 - 30196 (-)
Type: CAZyme
Location: 27572 - 30196 (-)
Gene ID: HRGMv2_1906_24_25
Type: pfam
Location: 30330 - 31346 (-)
Type: pfam
Location: 30330 - 31346 (-)
Gene ID: HRGMv2_1906_24_26
Type: pfam
Location: 31346 - 32053 (-)
Type: pfam
Location: 31346 - 32053 (-)
Gene ID: HRGMv2_1906_24_27
Type: CAZyme
Location: 32167 - 34290 (-)
Type: CAZyme
Location: 32167 - 34290 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.