Cluster: HRGMv2_1906_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_05181
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_31 | HRGMv2_1906_31_17 | 18639 | 19355 | + | 3.A.1.148.3 |
| NULL(UNKNOWN) | HRGMv2_1906_31 | HRGMv2_1906_31_18 | 19352 | 21691 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1906_31 | HRGMv2_1906_31_19 | 21798 | 23234 | + | GH1 |
Gene ID: HRGMv2_1906_31_17
Type: TC
Location: 18639 - 19355 (+)
Type: TC
Location: 18639 - 19355 (+)
Gene ID: HRGMv2_1906_31_18
Type:
Location: 19352 - 21691 (+)
Type:
Location: 19352 - 21691 (+)
Gene ID: HRGMv2_1906_31_19
Type: CAZyme
Location: 21798 - 23234 (+)
Type: CAZyme
Location: 21798 - 23234 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.