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Cluster: HRGMv2_1906_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1906_1 HRGMv2_1906_1_121 110459 111124 + 3.A.2.1.5
TC HRGMv2_1906_1 HRGMv2_1906_1_122 111181 111423 + 3.A.2.1.5
pfam HRGMv2_1906_1 HRGMv2_1906_1_123 111459 111962 + ATP-synt_B
pfam HRGMv2_1906_1 HRGMv2_1906_1_124 111962 112492 + OSCP
TC HRGMv2_1906_1 HRGMv2_1906_1_125 112501 114024 + 3.A.2.1.5
TC HRGMv2_1906_1 HRGMv2_1906_1_126 114028 114879 + 3.A.2.1.5
TC HRGMv2_1906_1 HRGMv2_1906_1_127 114891 116297 + 3.A.2.1.5
pfam HRGMv2_1906_1 HRGMv2_1906_1_128 116284 116685 + ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_1906_1 HRGMv2_1906_1_129 116769 117077 + 4.A.3.2.6
pfam HRGMv2_1906_1 HRGMv2_1906_1_130 117144 117968 + Amidase_3
CAZyme HRGMv2_1906_1 HRGMv2_1906_1_131 118030 119463 + CE4
TC HRGMv2_1906_1 HRGMv2_1906_1_132 119538 119933 + 1.A.22.1.8
Gene ID: HRGMv2_1906_1_121
Type: TC
Location: 110459 - 111124 (+)
Gene ID: HRGMv2_1906_1_122
Type: TC
Location: 111181 - 111423 (+)
Gene ID: HRGMv2_1906_1_123
Type: pfam
Location: 111459 - 111962 (+)
Gene ID: HRGMv2_1906_1_124
Type: pfam
Location: 111962 - 112492 (+)
Gene ID: HRGMv2_1906_1_125
Type: TC
Location: 112501 - 114024 (+)
Gene ID: HRGMv2_1906_1_126
Type: TC
Location: 114028 - 114879 (+)
Gene ID: HRGMv2_1906_1_127
Type: TC
Location: 114891 - 116297 (+)
Gene ID: HRGMv2_1906_1_128
Type: pfam
Location: 116284 - 116685 (+)
Gene ID: HRGMv2_1906_1_129
Type: TC
Location: 116769 - 117077 (+)
Gene ID: HRGMv2_1906_1_130
Type: pfam
Location: 117144 - 117968 (+)
Gene ID: HRGMv2_1906_1_131
Type: CAZyme
Location: 118030 - 119463 (+)
Gene ID: HRGMv2_1906_1_132
Type: TC
Location: 119538 - 119933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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