Cluster: HRGMv2_1906_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_02607
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_1 | HRGMv2_1906_1_41 | 35231 | 36253 | - | GH25 |
| peptidase | HRGMv2_1906_1 | HRGMv2_1906_1_42 | 36437 | 37624 | + | C40.UPW |
| NULL(UNKNOWN) | HRGMv2_1906_1 | HRGMv2_1906_1_43 | 37718 | 38254 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1906_1 | HRGMv2_1906_1_44 | 38318 | 40156 | - | 4.A.2.1.4 |
Gene ID: HRGMv2_1906_1_41
Type: CAZyme
Location: 35231 - 36253 (-)
Type: CAZyme
Location: 35231 - 36253 (-)
Gene ID: HRGMv2_1906_1_42
Type: peptidase
Location: 36437 - 37624 (+)
Type: peptidase
Location: 36437 - 37624 (+)
Gene ID: HRGMv2_1906_1_43
Type:
Location: 37718 - 38254 (-)
Type:
Location: 37718 - 38254 (-)
Gene ID: HRGMv2_1906_1_44
Type: TC
Location: 38318 - 40156 (-)
Type: TC
Location: 38318 - 40156 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.