Cluster: HRGMv2_1906_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_00373
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_13 | HRGMv2_1906_13_34 | 30423 | 32024 | + | 3.A.1.121.4 |
| TF | HRGMv2_1906_13 | HRGMv2_1906_13_35 | 32081 | 32956 | + | HTH_6 |
| CAZyme | HRGMv2_1906_13 | HRGMv2_1906_13_36 | 33078 | 34496 | + | GH1 |
Gene ID: HRGMv2_1906_13_34
Type: TC
Location: 30423 - 32024 (+)
Type: TC
Location: 30423 - 32024 (+)
Gene ID: HRGMv2_1906_13_35
Type: TF
Location: 32081 - 32956 (+)
Type: TF
Location: 32081 - 32956 (+)
Gene ID: HRGMv2_1906_13_36
Type: CAZyme
Location: 33078 - 34496 (+)
Type: CAZyme
Location: 33078 - 34496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.