Cluster: HRGMv2_1906_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_03019
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_19 | HRGMv2_1906_19_39 | 33531 | 34937 | - | GH4 |
| pfam | HRGMv2_1906_19 | HRGMv2_1906_19_40 | 34952 | 35671 | - | Glucosamine_iso |
| NULL(UNKNOWN) | HRGMv2_1906_19 | HRGMv2_1906_19_41 | 35690 | 35959 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1906_19 | HRGMv2_1906_19_42 | 35989 | 37308 | - | 4.A.3.2.9 |
Gene ID: HRGMv2_1906_19_39
Type: CAZyme
Location: 33531 - 34937 (-)
Type: CAZyme
Location: 33531 - 34937 (-)
Gene ID: HRGMv2_1906_19_40
Type: pfam
Location: 34952 - 35671 (-)
Type: pfam
Location: 34952 - 35671 (-)
Gene ID: HRGMv2_1906_19_41
Type:
Location: 35690 - 35959 (-)
Type:
Location: 35690 - 35959 (-)
Gene ID: HRGMv2_1906_19_42
Type: TC
Location: 35989 - 37308 (-)
Type: TC
Location: 35989 - 37308 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.