Cluster: HRGMv2_1906_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- CGC Family ID: CGCFAM_06782
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_24 | HRGMv2_1906_24_3 | 3520 | 4359 | + | 2.A.119.2.2 |
| pfam | HRGMv2_1906_24 | HRGMv2_1906_24_4 | 4382 | 6931 | - | GTP_EFTU | EFG_C | EFG_IV | NYN_YacP | EFG_III |
| NULL(UNKNOWN) | HRGMv2_1906_24 | HRGMv2_1906_24_5 | 7033 | 7335 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1906_24 | HRGMv2_1906_24_6 | 7367 | 8842 | - | GH1 |
Gene ID: HRGMv2_1906_24_3
Type: TC
Location: 3520 - 4359 (+)
Type: TC
Location: 3520 - 4359 (+)
Gene ID: HRGMv2_1906_24_4
Type: pfam
Location: 4382 - 6931 (-)
Type: pfam
Location: 4382 - 6931 (-)
Gene ID: HRGMv2_1906_24_5
Type:
Location: 7033 - 7335 (+)
Type:
Location: 7033 - 7335 (+)
Gene ID: HRGMv2_1906_24_6
Type: CAZyme
Location: 7367 - 8842 (-)
Type: CAZyme
Location: 7367 - 8842 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.