Genome Details
Selected Rep_genome_ID: CGMR076809
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR076809 | 2,911,849 | 97.96% | 0% | China | Asia | CGMR |
| Rep_724 | 2,974,043 | 94.6712% | 0% | NA | NA | WIS |
| SPMP61_bin.72 | 2,832,682 | 94.42% | 0.68% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR076809_CGC35 | CGCFAM_00013 | Yes | 5 | 1 | |
| CGMR076809_CGC31 | CGCFAM_00143 | Yes | 4 | 1 | |
| CGMR076809_CGC32 | CGCFAM_00894 | Yes | 13 | 5 | |
| CGMR076809_CGC15 | CGCFAM_01008 | Yes | 3 | 1 | |
| CGMR076809_CGC24 | CGCFAM_01178 | Yes | 26 | 12 | |
| CGMR076809_CGC17 | CGCFAM_01200 | Yes | 4 | 1 | |
| CGMR076809_CGC5 | CGCFAM_01239 | Yes | 11 | 2 | host glycan |
| CGMR076809_CGC7 | CGCFAM_01284 | Yes | 12 | 7 | |
| CGMR076809_CGC4 | CGCFAM_02036 | Yes | 4 | 1 | |
| CGMR076809_CGC36 | CGCFAM_02094 | Yes | 7 | 2 | |
| CGMR076809_CGC29 | CGCFAM_02550 | Yes | 5 | 1 | |
| CGMR076809_CGC8 | CGCFAM_02551 | Yes | 7 | 1 | |
| CGMR076809_CGC16 | CGCFAM_03334 | Yes | 3 | 1 | |
| CGMR076809_CGC34 | CGCFAM_03335 | Yes | 4 | 1 | |
| CGMR076809_CGC9 | CGCFAM_03460 | Yes | 6 | 2 | |
| CGMR076809_CGC26 | CGCFAM_04766 | Yes | 7 | 1 | |
| CGMR076809_CGC11 | CGCFAM_07548 | Yes | 4 | 1 | |
| CGMR076809_CGC28 | CGCFAM_07549 | Yes | 3 | 1 | |
| CGMR076809_CGC20 | CGCFAM_08978 | Yes | 6 | 1 |
Top CAZyme Families