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Cluster: CGMR076809_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53100 k141_53100_64 73351 75216 + 2.A.47.4.8
NULL(UNKNOWN) k141_53100 k141_53100_65 75343 75576 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_53100 k141_53100_66 75912 76943 - GT10
TC k141_53100 k141_53100_67 77100 79181 - 9.B.97.5.1
CAZyme k141_53100 k141_53100_68 79280 80278 - GT10
CAZyme k141_53100 k141_53100_69 80401 81570 - GT4
NULL(UNKNOWN) k141_53100 k141_53100_70 81851 82660 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_53100 k141_53100_71 82687 83841 - GT2
pfam k141_53100 k141_53100_72 84143 85129 + 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme k141_53100 k141_53100_73 85151 86125 + GT9
CAZyme k141_53100 k141_53100_74 86122 87147 + GT2
CAZyme k141_53100 k141_53100_75 87168 88151 + GT8
Gene ID: k141_53100_64
Type: TC
Location: 73351 - 75216 (+)
Gene ID: k141_53100_65
Type:
Location: 75343 - 75576 (+)
Gene ID: k141_53100_66
Type: CAZyme
Location: 75912 - 76943 (-)
Gene ID: k141_53100_67
Type: TC
Location: 77100 - 79181 (-)
Gene ID: k141_53100_68
Type: CAZyme
Location: 79280 - 80278 (-)
Gene ID: k141_53100_69
Type: CAZyme
Location: 80401 - 81570 (-)
Gene ID: k141_53100_70
Type:
Location: 81851 - 82660 (-)
Gene ID: k141_53100_71
Type: CAZyme
Location: 82687 - 83841 (-)
Gene ID: k141_53100_72
Type: pfam
Location: 84143 - 85129 (+)
Gene ID: k141_53100_73
Type: CAZyme
Location: 85151 - 86125 (+)
Gene ID: k141_53100_74
Type: CAZyme
Location: 86122 - 87147 (+)
Gene ID: k141_53100_75
Type: CAZyme
Location: 87168 - 88151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_53100_65 vegetarian > vegan 1.19447 0.00947

🧭 Explore Read Mapping of CGC

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