Cluster: CGMR076809_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_04766
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_51969 | k141_51969_19 | 26874 | 27656 | + | 1.A.30.2.9 |
| pfam | k141_51969 | k141_51969_20 | 27693 | 28139 | + | ExbD |
| STP | k141_51969 | k141_51969_21 | 28136 | 30568 | + | TPR_2 |
| CAZyme | k141_51969 | k141_51969_22 | 30592 | 32382 | + | GT51 |
| pfam | k141_51969 | k141_51969_23 | 32414 | 33178 | + | Inositol_P |
| pfam | k141_51969 | k141_51969_24 | 33199 | 33708 | + | YgbB |
| TC | k141_51969 | k141_51969_25 | 34408 | 36306 | - | 2.A.9.3.7 |
Gene ID: k141_51969_19
Type: TC
Location: 26874 - 27656 (+)
Type: TC
Location: 26874 - 27656 (+)
Gene ID: k141_51969_20
Type: pfam
Location: 27693 - 28139 (+)
Type: pfam
Location: 27693 - 28139 (+)
Gene ID: k141_51969_21
Type: STP
Location: 28136 - 30568 (+)
Type: STP
Location: 28136 - 30568 (+)
Gene ID: k141_51969_22
Type: CAZyme
Location: 30592 - 32382 (+)
Type: CAZyme
Location: 30592 - 32382 (+)
Gene ID: k141_51969_23
Type: pfam
Location: 32414 - 33178 (+)
Type: pfam
Location: 32414 - 33178 (+)
Gene ID: k141_51969_24
Type: pfam
Location: 33199 - 33708 (+)
Type: pfam
Location: 33199 - 33708 (+)
Gene ID: k141_51969_25
Type: TC
Location: 34408 - 36306 (-)
Type: TC
Location: 34408 - 36306 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.