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Cluster: CGMR076809_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30196 k141_30196_34 47767 49323 + GH20
pfam k141_30196 k141_30196_35 49446 50861 + tRNA-synt_1e | DALR_2 | CysS_C
STP k141_30196 k141_30196_36 50867 51211 + AraC_binding
TC k141_30196 k141_30196_37 51208 52143 + 2.A.7.3.36
NULL(UNKNOWN) k141_30196 k141_30196_38 52290 52940 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_30196 k141_30196_39 53036 55030 - 3.A.1.121.4
TC k141_30196 k141_30196_40 55114 55617 - 3.D.1.8.1
Gene ID: k141_30196_34
Type: CAZyme
Location: 47767 - 49323 (+)
Gene ID: k141_30196_35
Type: pfam
Location: 49446 - 50861 (+)
Gene ID: k141_30196_36
Type: STP
Location: 50867 - 51211 (+)
Gene ID: k141_30196_37
Type: TC
Location: 51208 - 52143 (+)
Gene ID: k141_30196_38
Type:
Location: 52290 - 52940 (+)
Gene ID: k141_30196_39
Type: TC
Location: 53036 - 55030 (-)
Gene ID: k141_30196_40
Type: TC
Location: 55114 - 55617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_30196_34 vegetarian > omnivore 2.89545 0.02551
k141_30196_34 vegetarian > vegan 1.70894 0.01468
k141_30196_36 vegetarian > vegan 1.43671 0.01468
k141_30196_37 vegetarian > omnivore 1.81845 0.02630

🧭 Explore Read Mapping of CGC

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