Cluster: CGMR076809_CGC36
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_02094
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3156 | k141_3156_41 | 47467 | 48915 | + | GH20 |
| NULL(UNKNOWN) | k141_3156 | k141_3156_42 | 49512 | 51554 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| sulfatase | k141_3156 | k141_3156_43 | 52820 | 54340 | - | S1_8 |
| TC | k141_3156 | k141_3156_44 | 54800 | 56056 | + | 9.B.176.1.2 |
| pfam | k141_3156 | k141_3156_45 | 56400 | 57725 | + | SASA |
| CAZyme | k141_3156 | k141_3156_46 | 60085 | 61269 | + | GH33 |
| TC | k141_3156 | k141_3156_47 | 61810 | 62277 | + | 2.A.7.1.4 |
Gene ID: k141_3156_41
Type: CAZyme
Location: 47467 - 48915 (+)
Type: CAZyme
Location: 47467 - 48915 (+)
Gene ID: k141_3156_42
Type:
Location: 49512 - 51554 (+)
Type:
Location: 49512 - 51554 (+)
Gene ID: k141_3156_43
Type: sulfatase
Location: 52820 - 54340 (-)
Type: sulfatase
Location: 52820 - 54340 (-)
Gene ID: k141_3156_44
Type: TC
Location: 54800 - 56056 (+)
Type: TC
Location: 54800 - 56056 (+)
Gene ID: k141_3156_45
Type: pfam
Location: 56400 - 57725 (+)
Type: pfam
Location: 56400 - 57725 (+)
Gene ID: k141_3156_46
Type: CAZyme
Location: 60085 - 61269 (+)
Type: CAZyme
Location: 60085 - 61269 (+)
Gene ID: k141_3156_47
Type: TC
Location: 61810 - 62277 (+)
Type: TC
Location: 61810 - 62277 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_3156_47 | vegetarian > omnivore | 1.03350 | 0.02630 |