Cluster: CGMR076809_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_02036
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22163 | k141_22163_66 | 63298 | 64266 | + | CE4 |
| TC | k141_22163 | k141_22163_67 | 64469 | 66895 | + | 2.A.6.4.3 |
| pfam | k141_22163 | k141_22163_68 | 67178 | 68338 | - | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_5 | EF-hand_7 | EF-hand_7 |
| TC | k141_22163 | k141_22163_69 | 68620 | 69735 | - | 1.A.54.5.3 |
Gene ID: k141_22163_66
Type: CAZyme
Location: 63298 - 64266 (+)
Type: CAZyme
Location: 63298 - 64266 (+)
Gene ID: k141_22163_67
Type: TC
Location: 64469 - 66895 (+)
Type: TC
Location: 64469 - 66895 (+)
Gene ID: k141_22163_68
Type: pfam
Location: 67178 - 68338 (-)
Type: pfam
Location: 67178 - 68338 (-)
Gene ID: k141_22163_69
Type: TC
Location: 68620 - 69735 (-)
Type: TC
Location: 68620 - 69735 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.