Cluster: CGMR076809_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_03460
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_106767 | k141_106767_4 | 2137 | 5631 | - | 1.B.12.4.2 |
| TC | k141_106767 | k141_106767_5 | 5821 | 10398 | - | 1.B.12.4.2 |
| pfam | k141_106767 | k141_106767_6 | 10759 | 11244 | + | SocA_Panacea |
| NULL(UNKNOWN) | k141_106767 | k141_106767_7 | 11578 | 12993 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_106767 | k141_106767_8 | 13153 | 14721 | + | GH20 |
| CAZyme | k141_106767 | k141_106767_9 | 14756 | 16270 | + | GH20 |
Gene ID: k141_106767_4
Type: TC
Location: 2137 - 5631 (-)
Type: TC
Location: 2137 - 5631 (-)
Gene ID: k141_106767_5
Type: TC
Location: 5821 - 10398 (-)
Type: TC
Location: 5821 - 10398 (-)
Gene ID: k141_106767_6
Type: pfam
Location: 10759 - 11244 (+)
Type: pfam
Location: 10759 - 11244 (+)
Gene ID: k141_106767_7
Type:
Location: 11578 - 12993 (-)
Type:
Location: 11578 - 12993 (-)
Gene ID: k141_106767_8
Type: CAZyme
Location: 13153 - 14721 (+)
Type: CAZyme
Location: 13153 - 14721 (+)
Gene ID: k141_106767_9
Type: CAZyme
Location: 14756 - 16270 (+)
Type: CAZyme
Location: 14756 - 16270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_106767_6 | vegetarian > vegan | 1.21014 | 0.01468 |