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Cluster: CGMR076809_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_73122 k141_73122_12 17385 20036 - 9.B.14.3.3
pfam k141_73122 k141_73122_13 20129 20704 - Ferritin | Rubrerythrin | RUBY_RBDX
NULL(UNKNOWN) k141_73122 k141_73122_14 20789 21415 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_73122 k141_73122_15 21439 23958 - 3.A.12.1.1
TC k141_73122 k141_73122_16 24496 25158 + 9.B.18.1.1
TC k141_73122 k141_73122_17 25190 25972 + 1.B.18.3.2
TC k141_73122 k141_73122_18 26045 28411 + 8.A.3.1.2
pfam k141_73122 k141_73122_19 28479 29084 + CpsB_CapC
CAZyme k141_73122 k141_73122_20 29103 29879 + GT2
CAZyme k141_73122 k141_73122_21 29928 31082 + GT4
CAZyme k141_73122 k141_73122_22 31079 32266 + GT4
CAZyme k141_73122 k141_73122_23 32282 33421 + GT4
CAZyme k141_73122 k141_73122_24 33462 34634 + GT4
NULL(UNKNOWN) k141_73122 k141_73122_25 34631 35593 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_73122 k141_73122_26 35684 36841 + Wzy_C
CAZyme k141_73122 k141_73122_27 36828 37970 + GT4
CAZyme k141_73122 k141_73122_28 37967 39103 + GT4
CAZyme k141_73122 k141_73122_29 39100 40281 + GT4
NULL(UNKNOWN) k141_73122 k141_73122_30 40304 41911 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_73122 k141_73122_31 41908 42459 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_73122 k141_73122_32 42452 43300 + GT2
CAZyme k141_73122 k141_73122_33 43325 44332 + GT2
pfam k141_73122 k141_73122_34 44366 45373 + Acyl_transf_3
CAZyme k141_73122 k141_73122_35 45401 46429 + GT2
NULL(UNKNOWN) k141_73122 k141_73122_36 46426 46533 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_73122 k141_73122_37 46560 47585 + GT2
Gene ID: k141_73122_12
Type: TC
Location: 17385 - 20036 (-)
Gene ID: k141_73122_13
Type: pfam
Location: 20129 - 20704 (-)
Gene ID: k141_73122_14
Type:
Location: 20789 - 21415 (-)
Gene ID: k141_73122_15
Type: TC
Location: 21439 - 23958 (-)
Gene ID: k141_73122_16
Type: TC
Location: 24496 - 25158 (+)
Gene ID: k141_73122_17
Type: TC
Location: 25190 - 25972 (+)
Gene ID: k141_73122_18
Type: TC
Location: 26045 - 28411 (+)
Gene ID: k141_73122_19
Type: pfam
Location: 28479 - 29084 (+)
Gene ID: k141_73122_20
Type: CAZyme
Location: 29103 - 29879 (+)
Gene ID: k141_73122_21
Type: CAZyme
Location: 29928 - 31082 (+)
Gene ID: k141_73122_22
Type: CAZyme
Location: 31079 - 32266 (+)
Gene ID: k141_73122_23
Type: CAZyme
Location: 32282 - 33421 (+)
Gene ID: k141_73122_24
Type: CAZyme
Location: 33462 - 34634 (+)
Gene ID: k141_73122_25
Type:
Location: 34631 - 35593 (+)
Gene ID: k141_73122_26
Type: pfam
Location: 35684 - 36841 (+)
Gene ID: k141_73122_27
Type: CAZyme
Location: 36828 - 37970 (+)
Gene ID: k141_73122_28
Type: CAZyme
Location: 37967 - 39103 (+)
Gene ID: k141_73122_29
Type: CAZyme
Location: 39100 - 40281 (+)
Gene ID: k141_73122_30
Type:
Location: 40304 - 41911 (+)
Gene ID: k141_73122_31
Type:
Location: 41908 - 42459 (+)
Gene ID: k141_73122_32
Type: CAZyme
Location: 42452 - 43300 (+)
Gene ID: k141_73122_33
Type: CAZyme
Location: 43325 - 44332 (+)
Gene ID: k141_73122_34
Type: pfam
Location: 44366 - 45373 (+)
Gene ID: k141_73122_35
Type: CAZyme
Location: 45401 - 46429 (+)
Gene ID: k141_73122_36
Type:
Location: 46426 - 46533 (+)
Gene ID: k141_73122_37
Type: CAZyme
Location: 46560 - 47585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_73122_31 vegetarian > omnivore 1.25491 0.02630
k141_73122_31 vegetarian > vegan 1.24610 0.01432

🧭 Explore Read Mapping of CGC

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