Cluster: CGMR076809_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_08978
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_95967 | k141_95967_44 | 48660 | 50309 | - | GH20 |
| TC | k141_95967 | k141_95967_45 | 50436 | 51938 | - | 3.A.5.1.1 |
| peptidase | k141_95967 | k141_95967_46 | 51987 | 52922 | + | U32.UPW |
| pfam | k141_95967 | k141_95967_47 | 52938 | 53936 | + | Methyltransf_28 |
| TC | k141_95967 | k141_95967_48 | 54409 | 54990 | + | 3.D.1.3.1 |
| TC | k141_95967 | k141_95967_49 | 55045 | 55629 | + | 3.D.1.5.1 |
Gene ID: k141_95967_44
Type: CAZyme
Location: 48660 - 50309 (-)
Type: CAZyme
Location: 48660 - 50309 (-)
Gene ID: k141_95967_45
Type: TC
Location: 50436 - 51938 (-)
Type: TC
Location: 50436 - 51938 (-)
Gene ID: k141_95967_46
Type: peptidase
Location: 51987 - 52922 (+)
Type: peptidase
Location: 51987 - 52922 (+)
Gene ID: k141_95967_47
Type: pfam
Location: 52938 - 53936 (+)
Type: pfam
Location: 52938 - 53936 (+)
Gene ID: k141_95967_48
Type: TC
Location: 54409 - 54990 (+)
Type: TC
Location: 54409 - 54990 (+)
Gene ID: k141_95967_49
Type: TC
Location: 55045 - 55629 (+)
Type: TC
Location: 55045 - 55629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.