Cluster: CGMR076809_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_07549
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11437 | k141_11437_18 | 18732 | 20780 | - | GH33 |
| NULL(UNKNOWN) | k141_11437 | k141_11437_19 | 20925 | 21524 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_11437 | k141_11437_20 | 21625 | 23556 | + | 2.A.1.7.5 |
Gene ID: k141_11437_18
Type: CAZyme
Location: 18732 - 20780 (-)
Type: CAZyme
Location: 18732 - 20780 (-)
Gene ID: k141_11437_19
Type:
Location: 20925 - 21524 (-)
Type:
Location: 20925 - 21524 (-)
Gene ID: k141_11437_20
Type: TC
Location: 21625 - 23556 (+)
Type: TC
Location: 21625 - 23556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_11437_19 | vegetarian > vegan | 1.08379 | 0.01468 |