Cluster: CGMR076809_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_02550
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3099 | k141_3099_3 | 1355 | 2596 | - | 2.A.3.6.4 |
| pfam | k141_3099 | k141_3099_4 | 2814 | 3500 | + | Hydrolase | HAD | HAD_2 |
| TC | k141_3099 | k141_3099_5 | 3560 | 4672 | + | 2.A.86.1.4 |
| pfam | k141_3099 | k141_3099_6 | 4676 | 5965 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | k141_3099 | k141_3099_7 | 6130 | 7782 | + | GH20 |
Gene ID: k141_3099_3
Type: TC
Location: 1355 - 2596 (-)
Type: TC
Location: 1355 - 2596 (-)
Gene ID: k141_3099_4
Type: pfam
Location: 2814 - 3500 (+)
Type: pfam
Location: 2814 - 3500 (+)
Gene ID: k141_3099_5
Type: TC
Location: 3560 - 4672 (+)
Type: TC
Location: 3560 - 4672 (+)
Gene ID: k141_3099_6
Type: pfam
Location: 4676 - 5965 (+)
Type: pfam
Location: 4676 - 5965 (+)
Gene ID: k141_3099_7
Type: CAZyme
Location: 6130 - 7782 (+)
Type: CAZyme
Location: 6130 - 7782 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_3099_4 | vegetarian > omnivore | 1.31528 | 0.01810 |