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Cluster: CGMR076809_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_97877 k141_97877_116 136308 137030 - 3.A.1.3.15
TC k141_97877 k141_97877_117 137050 138534 - 3.A.1.3.17
CAZyme k141_97877 k141_97877_118 138688 139758 - GT2
pfam k141_97877 k141_97877_119 140191 141321 + EpsG
CAZyme k141_97877 k141_97877_120 141318 142436 + GT4
TC k141_97877 k141_97877_121 142433 143044 + 9.B.18.1.2
pfam k141_97877 k141_97877_122 143041 144828 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N
TC k141_97877 k141_97877_123 144840 146828 + 9.B.18.2.1
TC k141_97877 k141_97877_124 146847 147632 + 1.B.18.3.1
TC k141_97877 k141_97877_125 147637 150030 + 8.A.3.3.4
CAZyme k141_97877 k141_97877_126 150041 151174 + GT4
CAZyme k141_97877 k141_97877_127 151171 152319 + GT4
CAZyme k141_97877 k141_97877_128 152326 153333 + GT2
Gene ID: k141_97877_116
Type: TC
Location: 136308 - 137030 (-)
Gene ID: k141_97877_117
Type: TC
Location: 137050 - 138534 (-)
Gene ID: k141_97877_118
Type: CAZyme
Location: 138688 - 139758 (-)
Gene ID: k141_97877_119
Type: pfam
Location: 140191 - 141321 (+)
Gene ID: k141_97877_120
Type: CAZyme
Location: 141318 - 142436 (+)
Gene ID: k141_97877_121
Type: TC
Location: 142433 - 143044 (+)
Gene ID: k141_97877_122
Type: pfam
Location: 143041 - 144828 (+)
Gene ID: k141_97877_123
Type: TC
Location: 144840 - 146828 (+)
Gene ID: k141_97877_124
Type: TC
Location: 146847 - 147632 (+)
Gene ID: k141_97877_125
Type: TC
Location: 147637 - 150030 (+)
Gene ID: k141_97877_126
Type: CAZyme
Location: 150041 - 151174 (+)
Gene ID: k141_97877_127
Type: CAZyme
Location: 151171 - 152319 (+)
Gene ID: k141_97877_128
Type: CAZyme
Location: 152326 - 153333 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_97877_116 vegetarian > vegan 1.61595 0.01468

🧭 Explore Read Mapping of CGC

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