Cluster: CGMR076809_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3156 | k141_3156_16 | 17737 | 18861 | - | GT28 |
| TC | k141_3156 | k141_3156_17 | 18858 | 20000 | - | 2.A.103.1.1 |
| pfam | k141_3156 | k141_3156_18 | 20029 | 20829 | - | LysM | LysM |
| pfam | k141_3156 | k141_3156_19 | 20853 | 22163 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_3156 | k141_3156_20 | 22176 | 23279 | - | 9.B.146.1.3 |
Gene ID: k141_3156_16
Type: CAZyme
Location: 17737 - 18861 (-)
Type: CAZyme
Location: 17737 - 18861 (-)
Gene ID: k141_3156_17
Type: TC
Location: 18858 - 20000 (-)
Type: TC
Location: 18858 - 20000 (-)
Gene ID: k141_3156_18
Type: pfam
Location: 20029 - 20829 (-)
Type: pfam
Location: 20029 - 20829 (-)
Gene ID: k141_3156_19
Type: pfam
Location: 20853 - 22163 (-)
Type: pfam
Location: 20853 - 22163 (-)
Gene ID: k141_3156_20
Type: TC
Location: 22176 - 23279 (-)
Type: TC
Location: 22176 - 23279 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.