Cluster: CGMR076809_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_01200
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_119679 | k141_119679_15 | 19042 | 20004 | - | GT2 |
| pfam | k141_119679 | k141_119679_16 | 20398 | 21654 | - | SUFBD_core |
| pfam | k141_119679 | k141_119679_17 | 21663 | 23099 | - | SUFBD_core | SufBD_N |
| TC | k141_119679 | k141_119679_18 | 23124 | 23882 | - | 3.A.1.3.2 |
Gene ID: k141_119679_15
Type: CAZyme
Location: 19042 - 20004 (-)
Type: CAZyme
Location: 19042 - 20004 (-)
Gene ID: k141_119679_16
Type: pfam
Location: 20398 - 21654 (-)
Type: pfam
Location: 20398 - 21654 (-)
Gene ID: k141_119679_17
Type: pfam
Location: 21663 - 23099 (-)
Type: pfam
Location: 21663 - 23099 (-)
Gene ID: k141_119679_18
Type: TC
Location: 23124 - 23882 (-)
Type: TC
Location: 23124 - 23882 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.