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Cluster: CGMR076809_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40736 k141_40736_12 12945 14336 - GH33
STP k141_40736 k141_40736_13 14914 17589 + HATPase_c | HisKA
TF k141_40736 k141_40736_14 17607 18305 + Trans_reg_C
TC k141_40736 k141_40736_15 18459 18872 + 1.B.71.1.5
TC k141_40736 k141_40736_16 18902 19237 + 1.B.71.1.5
TC k141_40736 k141_40736_17 19352 21052 + 3.A.3.7.2
TC k141_40736 k141_40736_18 21086 23197 + 3.A.3.7.2
TC k141_40736 k141_40736_19 23227 23793 + 3.A.3.7.2
CAZyme k141_40736 k141_40736_20 23949 24893 - GH27
pfam k141_40736 k141_40736_21 24923 25498 - He_PIG | Melibiase_2
TC k141_40736 k141_40736_22 25687 28269 + 3.A.9.1.2
Gene ID: k141_40736_12
Type: CAZyme
Location: 12945 - 14336 (-)
Gene ID: k141_40736_13
Type: STP
Location: 14914 - 17589 (+)
Gene ID: k141_40736_14
Type: TF
Location: 17607 - 18305 (+)
Gene ID: k141_40736_15
Type: TC
Location: 18459 - 18872 (+)
Gene ID: k141_40736_16
Type: TC
Location: 18902 - 19237 (+)
Gene ID: k141_40736_17
Type: TC
Location: 19352 - 21052 (+)
Gene ID: k141_40736_18
Type: TC
Location: 21086 - 23197 (+)
Gene ID: k141_40736_19
Type: TC
Location: 23227 - 23793 (+)
Gene ID: k141_40736_20
Type: CAZyme
Location: 23949 - 24893 (-)
Gene ID: k141_40736_21
Type: pfam
Location: 24923 - 25498 (-)
Gene ID: k141_40736_22
Type: TC
Location: 25687 - 28269 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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