Cluster: CGMR076809_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076809
- CGC Family ID: CGCFAM_03335
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_31612 | k141_31612_29 | 21804 | 22454 | - | 1.A.30.3.3 |
| NULL(UNKNOWN) | k141_31612 | k141_31612_30 | 22510 | 23235 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_31612 | k141_31612_31 | 23412 | 24530 | + | Rotamase | Rotamase_2 | Rotamase_3 | SurA_N_2 | SurA_N_3 |
| CAZyme | k141_31612 | k141_31612_32 | 24839 | 27802 | + | CBM32 | GH2 |
Gene ID: k141_31612_29
Type: TC
Location: 21804 - 22454 (-)
Type: TC
Location: 21804 - 22454 (-)
Gene ID: k141_31612_30
Type:
Location: 22510 - 23235 (-)
Type:
Location: 22510 - 23235 (-)
Gene ID: k141_31612_31
Type: pfam
Location: 23412 - 24530 (+)
Type: pfam
Location: 23412 - 24530 (+)
Gene ID: k141_31612_32
Type: CAZyme
Location: 24839 - 27802 (+)
Type: CAZyme
Location: 24839 - 27802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.