Genome Details
Selected Rep_genome_ID: B1.bin_1
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Sarcina
Species
Sarcina perfringens
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG238_66 | 3,020,614 | 100% | 0% | NA | Africa | H3AfricaPhase2 |
| B1.bin_1 | 3,147,121 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR016659 | 3,097,820 | 99.19% | 0% | China | Asia | CGMR |
| SPMP78_bin.78 | 3,297,717 | 94.26% | 2.02% | Singapore | Asia | SPMP |
| YassourM_2018_SRR7280997_bin.2 | 2,617,448 | 93.71% | 0% | Finland | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| B1.bin_1_CGC17 | CGCFAM_00011 | Yes | 5 | 3 | |
| B1.bin_1_CGC33 | CGCFAM_00021 | Yes | 5 | 1 | |
| B1.bin_1_CGC11 | CGCFAM_00091 | Yes | 17 | 8 | |
| B1.bin_1_CGC26 | CGCFAM_00174 | Yes | 3 | 1 | alpha-glucan |
| B1.bin_1_CGC8 | CGCFAM_00242 | Yes | 7 | 1 | |
| B1.bin_1_CGC25 | CGCFAM_00250 | Yes | 4 | 1 | |
| B1.bin_1_CGC10 | CGCFAM_00489 | Yes | 8 | 4 | |
| B1.bin_1_CGC4 | CGCFAM_00537 | Yes | 5 | 1 | |
| B1.bin_1_CGC39 | CGCFAM_00620 | Yes | 5 | 2 | |
| B1.bin_1_CGC38 | CGCFAM_00778 | Yes | 6 | 4 | |
| B1.bin_1_CGC18 | CGCFAM_00903 | Yes | 8 | 2 | |
| B1.bin_1_CGC15 | CGCFAM_01028 | Yes | 3 | 1 | |
| B1.bin_1_CGC36 | CGCFAM_01073 | Yes | 10 | 4 | |
| B1.bin_1_CGC12 | CGCFAM_02074 | Yes | 5 | 1 | |
| B1.bin_1_CGC2 | CGCFAM_02396 | Yes | 4 | 1 | |
| B1.bin_1_CGC16 | CGCFAM_02602 | Yes | 4 | 1 | |
| B1.bin_1_CGC6 | CGCFAM_07459 | Yes | 4 | 2 |
Top CAZyme Families