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Cluster: B1.bin_1_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B1_contig_1146 B1_contig_1146_462 547339 548799 - 2.A.66.2.6
CAZyme B1_contig_1146 B1_contig_1146_463 548804 549754 - GT2
NULL(UNKNOWN) B1_contig_1146 B1_contig_1146_464 550169 551602 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B1_contig_1146 B1_contig_1146_465 551616 552593 - GT2
CAZyme B1_contig_1146 B1_contig_1146_466 552609 553706 - GT4
CAZyme B1_contig_1146 B1_contig_1146_467 553759 554796 - GT8
NULL(UNKNOWN) B1_contig_1146 B1_contig_1146_468 555830 555919 - NULL(UNKNOWN)
[View Structural Homologs]
TC B1_contig_1146 B1_contig_1146_469 556094 556378 - 8.A.3.3.4
Gene ID: B1_contig_1146_462
Type: TC
Location: 547339 - 548799 (-)
Gene ID: B1_contig_1146_463
Type: CAZyme
Location: 548804 - 549754 (-)
Gene ID: B1_contig_1146_464
Type:
Location: 550169 - 551602 (-)
Gene ID: B1_contig_1146_465
Type: CAZyme
Location: 551616 - 552593 (-)
Gene ID: B1_contig_1146_466
Type: CAZyme
Location: 552609 - 553706 (-)
Gene ID: B1_contig_1146_467
Type: CAZyme
Location: 553759 - 554796 (-)
Gene ID: B1_contig_1146_468
Type:
Location: 555830 - 555919 (-)
Gene ID: B1_contig_1146_469
Type: TC
Location: 556094 - 556378 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Sarcina
→
Species
Sarcina perfringens

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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